CDS

Accession Number TCMCG057C13625
gbkey CDS
Protein Id XP_018472833.1
Location join(24335125..24335200,24335261..24335453,24335693..24335741,24335834..24335902,24335979..24336041,24336120..24336330,24336402..24336534,24336620..24336743,24336828..24337254,24337327..24337397)
Gene LOC108844117
GeneID 108844117
Organism Raphanus sativus

Protein

Length 471aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018617331.1
Definition PREDICTED: eukaryotic peptide chain release factor GTP-binding subunit ERF3B-like isoform X1 [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category J
Description cytoplasmic translational termination
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko03012        [VIEW IN KEGG]
ko03019        [VIEW IN KEGG]
KEGG_ko ko:K03267        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03015        [VIEW IN KEGG]
map03015        [VIEW IN KEGG]
GOs GO:0000166        [VIEW IN EMBL-EBI]
GO:0000287        [VIEW IN EMBL-EBI]
GO:0000288        [VIEW IN EMBL-EBI]
GO:0000956        [VIEW IN EMBL-EBI]
GO:0001882        [VIEW IN EMBL-EBI]
GO:0001883        [VIEW IN EMBL-EBI]
GO:0002181        [VIEW IN EMBL-EBI]
GO:0002184        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003729        [VIEW IN EMBL-EBI]
GO:0003747        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0003924        [VIEW IN EMBL-EBI]
GO:0005085        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005525        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006401        [VIEW IN EMBL-EBI]
GO:0006402        [VIEW IN EMBL-EBI]
GO:0006412        [VIEW IN EMBL-EBI]
GO:0006415        [VIEW IN EMBL-EBI]
GO:0006518        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008022        [VIEW IN EMBL-EBI]
GO:0008079        [VIEW IN EMBL-EBI]
GO:0008135        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009056        [VIEW IN EMBL-EBI]
GO:0009057        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010494        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010629        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016071        [VIEW IN EMBL-EBI]
GO:0016462        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016817        [VIEW IN EMBL-EBI]
GO:0016818        [VIEW IN EMBL-EBI]
GO:0017076        [VIEW IN EMBL-EBI]
GO:0017111        [VIEW IN EMBL-EBI]
GO:0018444        [VIEW IN EMBL-EBI]
GO:0019001        [VIEW IN EMBL-EBI]
GO:0019003        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019439        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0019899        [VIEW IN EMBL-EBI]
GO:0022411        [VIEW IN EMBL-EBI]
GO:0032549        [VIEW IN EMBL-EBI]
GO:0032550        [VIEW IN EMBL-EBI]
GO:0032553        [VIEW IN EMBL-EBI]
GO:0032555        [VIEW IN EMBL-EBI]
GO:0032561        [VIEW IN EMBL-EBI]
GO:0032984        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0034655        [VIEW IN EMBL-EBI]
GO:0035639        [VIEW IN EMBL-EBI]
GO:0035770        [VIEW IN EMBL-EBI]
GO:0036094        [VIEW IN EMBL-EBI]
GO:0036464        [VIEW IN EMBL-EBI]
GO:0043043        [VIEW IN EMBL-EBI]
GO:0043167        [VIEW IN EMBL-EBI]
GO:0043168        [VIEW IN EMBL-EBI]
GO:0043169        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043603        [VIEW IN EMBL-EBI]
GO:0043604        [VIEW IN EMBL-EBI]
GO:0043624        [VIEW IN EMBL-EBI]
GO:0043933        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044248        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044265        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044270        [VIEW IN EMBL-EBI]
GO:0044271        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0046700        [VIEW IN EMBL-EBI]
GO:0046872        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0051020        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0065009        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0097367        [VIEW IN EMBL-EBI]
GO:0098772        [VIEW IN EMBL-EBI]
GO:1901265        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901361        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901566        [VIEW IN EMBL-EBI]
GO:1901575        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGAAGATTCTAAGAAGAGACGTCTAGAAGAAGAGACTGATGCGATTCTCACGAAGAGACCTAAGGCTGATGCAGTCTCAGGTGTGCATTGTGAGGCTGATGTGAGAATGCTAGACACAAGAAGTCACCTAACCATGCTCTTCATGGGGCCCTCTGGATCTGGAAAGTCGACTATTGTGGGACAAATTCTTCTACTGCTCGGCCTAGTGAGCATTGAAGAGCTGCAAGAGAATGAAGCACTAGCAATAGCTGATGATAGACAAGGCCGGCAGTTGGCGTACATAATAGACAATAAAGAGGACGACCATAGGCTCAATGATGAGATGCAGCTCGGAAACGCAAGCTTTGAGATTAAGAGCAGAACCTTTACTGTTTTGGATGCACCGGGTCAGAGTCGTTTGGTGCCAAAAATGATAAAAGGAGCATATGAGGCAGATTTGGGTATTCTGGTGATTTCAGCCTCTGATGGGGAGTTTGAACAATGTTTTTCGAGTCTGACTCAAGAGCATCTTCAACTCACAAGCGCTTTTGGAGTGGAGAAACTAATTGTTCTCATTAACAAAATGGACACCGTACTGTGGTCTACGGCTAGATTTGAGGAAATAGAAGAAAAGCTCTCCTCGTTTCTGTTTCTGAAAAATTACTTTCACAGCGAGAATGTTACCTTCTTACCAGTGTCGGGACTCCATGGAGACAACATTGAAATGTGTCGAAGTGGCACTGTGCGCTCTCTCTTTGACGTTCTCGAGGCTATGGATCTTGTTCCGAGAGGGGATGCTTCTGCGCCATTCAGAATGCCTATTATTCAAGTCTACACAAATGAGGACGGAAATCATGTCATTTATGGGAGGGTCTGCTCTGGAACGATAAAGAAGCATGATTACAAACATGATAACCTTGTTATCATGCCATATCAGGAACGTCCAAAGGTTGTTGCTTTGTACTGCATCAAGGGCAAGATAGAAGTTGATCAAGCGGGACCAGGTGACTATGTGTCAATCCACATAGTCCCTCCACATAACGACATCCACCCTGGCGCTGTGCTCTCCTCCGGCGGTGCTCTCAGTCGCACTAAGTCTTTTACTGCGGAGTTGCGTTTCCTAAAGACGCCTGCTAGGATGTATAATGGTTTCAAAGCCATGCTACACATCCATTCACTAGAGGTGCATAATTGTGAGATTGTTGAAATGAAAAAATTCACCAATGGATCCTGGTCAGGAAGAAGGCGTTTTGTGAAAGAAGGGGAATTTGCTCTCTGCCGTATAGAGGTTCCTGAGGACTACATCAGCATAGAAGAAATTGCTAATTTTCCTCAACTTGGGGAGTTAGTTTTAAGAACTGAAGGATATACAGTTGCGGTTGGGAATGTCATCTCTTGGGACCAAGATGAAGATGTTGTGATGGCTGGATTTTGA
Protein:  
MEDSKKRRLEEETDAILTKRPKADAVSGVHCEADVRMLDTRSHLTMLFMGPSGSGKSTIVGQILLLLGLVSIEELQENEALAIADDRQGRQLAYIIDNKEDDHRLNDEMQLGNASFEIKSRTFTVLDAPGQSRLVPKMIKGAYEADLGILVISASDGEFEQCFSSLTQEHLQLTSAFGVEKLIVLINKMDTVLWSTARFEEIEEKLSSFLFLKNYFHSENVTFLPVSGLHGDNIEMCRSGTVRSLFDVLEAMDLVPRGDASAPFRMPIIQVYTNEDGNHVIYGRVCSGTIKKHDYKHDNLVIMPYQERPKVVALYCIKGKIEVDQAGPGDYVSIHIVPPHNDIHPGAVLSSGGALSRTKSFTAELRFLKTPARMYNGFKAMLHIHSLEVHNCEIVEMKKFTNGSWSGRRRFVKEGEFALCRIEVPEDYISIEEIANFPQLGELVLRTEGYTVAVGNVISWDQDEDVVMAGF